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POPSICLE- a software suite to determine population structure and to establish genotype-phenotype associations using Next-generation sequencing data |  |
MAIN INDEX ANALYTICAL PIPELINE CONTACT SYSTEM REQUIREMENTS POPSICLE Package Download Manual pages in HTML format Used Case |
Convert2ARFFformat Prerequisites
It converts the baseline file into ARFF format How to run it? java -jar LPDtools.jar Convert2ARFFformat -i baselineFileFromStep6 -o outputArffFile Here, -i is the baseline files generated using FindDivergenceFromBaseline utility of POPSICLE. -o are the output files in .arff format Output See WEKA for details on arff file format. |
| CITATION: Jahangheer S. Shaik, Asis Khan and Michael E. Grigg, "POPSICLE: A Software Suite to Study Population Structure and Ancestral Determinants of Phenotypes using Whole genome Sequencing Data", submitted to PLoS special edition |